Welcome to moseq2-extract’s documentation!

Contents:

• moseq2_extract package
  • CLI Module
    • moseq2-extract
  • GUI Module
    • download_flip_command()
    • generate_index_command()
    • get_selected_sessions()
  • General Utilities Module
    • build_path()
    • camel_to_snake()
    • check_filter_sizes()
    • clean_dict()
    • clean_file_str()
    • click_param_annot()
    • command_with_config()
    • convert_pxs_to_mm()
    • convert_raw_to_avi_function()
    • detect_and_set_camera_parameters()
    • detect_avi_file()
    • dict_to_h5()
    • escape_path()
    • filter_warnings()
    • gen_batch_sequence()
    • generate_missing_metadata()
    • get_bucket_center()
    • get_frame_range_indices()
    • get_strels()
    • graduate_dilated_wall_area()
    • h5_to_dict()
    • load_found_session_paths()
    • load_metadata()
    • load_textdata()
    • load_timestamps()
    • make_gradient()
    • mouse_threshold_filter()
    • read_yaml()
    • recursive_find_h5s()
    • recursive_find_unextracted_dirs()
    • scalar_attributes()
    • select_strel()
    • set_bground_to_plane_fit()
    • strided_app()
    • time_str_for_filename()
  • Subpackages
    • moseq2_extract.extract package
    • moseq2_extract.helpers package
    • moseq2_extract.io package

Index

• Index